HL_8G6J_060

3D structure

PDB id

8G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAGGCCCGGGCCGCCGGUGAAAUAC

Length

26 nucleotides

Bulged bases

8G6J|1|L5|A|3972, 8G6J|1|L5|G|4035

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G6J|1|L5|G|3970
8G6J|1|L5|G|3971
8G6J|1|L5|A|3972
8G6J|1|L5|G|3973
8G6J|1|L5|G|3974
8G6J|1|L5|C|3975
8G6J|1|L5|C|3976
8G6J|1|L5|C|3977
8G6J|1|L5|G|4034
8G6J|1|L5|G|4035
8G6J|1|L5|G|4036
8G6J|1|L5|C|4037
8G6J|1|L5|C|4038
8G6J|1|L5|G|4039
8G6J|1|L5|C|4040
8G6J|1|L5|C|4041
8G6J|1|L5|G|4042
8G6J|1|L5|G|4043
8G6J|1|L5|U|4044
8G6J|1|L5|G|4045
8G6J|1|L5|A|4046
8G6J|1|L5|A|4047
8G6J|1|L5|A|4048
8G6J|1|L5|U|4049
8G6J|1|L5|A|4050
8G6J|1|L5|C|4051

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lz

60S ribosomal protein L10a

Chain SF

40S ribosomal protein S5