HL_8G6J_122

3D structure

PDB id

8G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGGGGUGCCCUG

Length

12 nucleotides

Bulged bases

8G6J|1|S2|U|1761, 8G6J|1|S2|C|1773

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G6J|1|S2|C|1756
8G6J|1|S2|G|1757
8G6J|1|S2|G|1758
8G6J|1|S2|G|1759
8G6J|1|S2|G|1760
8G6J|1|S2|U|1761
8G6J|1|S2|G|1771
8G6J|1|S2|C|1772
8G6J|1|S2|C|1773
8G6J|1|S2|C|1774
8G6J|1|S2|U|1775
8G6J|1|S2|G|1776

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6