HL_8G6W_012

3D structure

PDB id

8G6W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8G6W|1|A|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G6W_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2544

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8G6W|1|A|G|462
8G6W|1|A|U|463
8G6W|1|A|U|464
8G6W|1|A|A|465
8G6W|1|A|A|466
8G6W|1|A|U|467
8G6W|1|A|A|468
8G6W|1|A|C|469
8G6W|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains