HL_8G6W_013

3D structure

PDB id

8G6W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G6W_013 not in the Motif Atlas

Homologous match to HL_4LFB_013

Geometric discrepancy: 0.1228

The information below is about HL_4LFB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G6W|1|A|G|521
8G6W|1|A|C|522
8G6W|1|A|A|523
8G6W|1|A|G|524
8G6W|1|A|C|525
8G6W|1|A|C|526
8G6W|1|A|G7M|527
8G6W|1|A|C|528

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain X

mRNA