HL_8G6W_025

3D structure

PDB id

8G6W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

8G6W|1|A|G|1139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G6W_025 not in the Motif Atlas

Homologous match to HL_5J7L_025

Geometric discrepancy: 0.357

The information below is about HL_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

8G6W|1|A|G|1134
8G6W|1|A|U|1135
8G6W|1|A|C|1136
8G6W|1|A|C|1137
8G6W|1|A|G|1138
8G6W|1|A|G|1139
8G6W|1|A|C|1140

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9