HL_8G6W_055

3D structure

PDB id

8G6W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

8G6W|1|a|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G6W_055 not in the Motif Atlas

Geometric match to HL_4V9F_036

Geometric discrepancy: 0.25

The information below is about HL_4V9F_036

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

8G6W|1|a|C|611
8G6W|1|a|G|612
8G6W|1|a|A|613
8G6W|1|a|A|614
8G6W|1|a|U|615
8G6W|1|a|A|616
8G6W|1|a|G|617

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

50S ribosomal protein L4