HL_8G6W_091

3D structure

PDB id

8G6W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G6W_091 not in the Motif Atlas

Homologous match to HL_7RQB_058

Geometric discrepancy: 0.0699

The information below is about HL_7RQB_058

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

8G6W|1|a|C|2374
8G6W|1|a|G|2375
8G6W|1|a|A|2376
8G6W|1|a|A|2377
8G6W|1|a|A|2378
8G6W|1|a|G|2379

Current chains

Chain a

23S rRNA

Nearby chains

Chain n

50S ribosomal protein L18