HL_8G6X_046

3D structure

PDB id

8G6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe

Experimental method

ELECTRON MICROSCOPY

Resolution

2.31 Å

Loop

Sequence

CUCG

Length

4 nucleotides

Bulged bases

8G6X|1|a|U|1729, 8G6X|1|a|C|1730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G6X_046 not in the Motif Atlas

Geometric match to HL_4WF9_037

Geometric discrepancy: 0.395

The information below is about HL_4WF9_037

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8G6X|1|a|C|1728
8G6X|1|a|U|1729
8G6X|1|a|C|1730
8G6X|1|a|G|1731

Current chains

Chain a

23S rRNA

Nearby chains