HL_8G6Y_027
3D structure
- PDB id
- 8G6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.09 Å
Loop
- Sequence
- GGUAACAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G6Y_027 not in the Motif Atlas
- Homologous match to HL_5J7L_154
- Geometric discrepancy: 0.1406
- The information below is about HL_5J7L_154
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
8G6Y|1|a|G|712
8G6Y|1|a|G|713
8G6Y|1|a|U|714
8G6Y|1|a|A|715
8G6Y|1|a|A|716
8G6Y|1|a|C|717
8G6Y|1|a|A|718
8G6Y|1|a|C|719
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: