HL_8G7Q_025

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7Q_025 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.3756

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

8G7Q|1|A|C|885
8G7Q|1|A|A|886
8G7Q|1|A|U|887
8G7Q|1|A|C|888
8G7Q|1|A|C|889
8G7Q|1|A|C|890
8G7Q|1|A|G|891

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13