HL_8G7Q_042

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

8G7Q|1|A|U|1729, 8G7Q|1|A|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7Q_042 not in the Motif Atlas

Geometric match to HL_5J7L_018

Geometric discrepancy: 0.2324

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

8G7Q|1|A|C|1727
8G7Q|1|A|C|1728
8G7Q|1|A|U|1729
8G7Q|1|A|C|1730
8G7Q|1|A|G|1731
8G7Q|1|A|C|1732
8G7Q|1|A|G|1733

Current chains

Chain A

23S Ribosomal RNA

Nearby chains