HL_8G7Q_083

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8G7Q|1|a|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7Q_083 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.284

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8G7Q|1|a|G|462
8G7Q|1|a|U|463
8G7Q|1|a|U|464
8G7Q|1|a|A|465
8G7Q|1|a|A|466
8G7Q|1|a|U|467
8G7Q|1|a|A|468
8G7Q|1|a|C|469
8G7Q|1|a|C|470

Current chains

Chain a

16S Ribosomal RNA

Nearby chains