HL_8G7Q_097

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

8G7Q|1|a|A|1167, 8G7Q|1|a|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7Q_097 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.3266

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8G7Q|1|a|U|1165
8G7Q|1|a|G|1166
8G7Q|1|a|A|1167
8G7Q|1|a|U|1168
8G7Q|1|a|A|1169
8G7Q|1|a|A|1170
8G7Q|1|a|A|1171

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain b

30S ribosomal protein S2