HL_8G7Q_114
3D structure
- PDB id
- 8G7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACU(M3X)AU(T6A)A(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: M3X, T6A, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G7Q_114 not in the Motif Atlas
- Homologous match to HL_5E81_235
- Geometric discrepancy: 0.1675
- The information below is about HL_5E81_235
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 29
Unit IDs
8G7Q|1|w|A|31
8G7Q|1|w|C|32
8G7Q|1|w|U|33
8G7Q|1|w|M3X|34
8G7Q|1|w|A|35
8G7Q|1|w|U|36
8G7Q|1|w|T6A|37
8G7Q|1|w|A|38
8G7Q|1|w|PSU|39
Current chains
- Chain w
- Isoleucine tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain l
- 30S ribosomal protein S12
- Chain v
- M-M mRNA
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