HL_8G7S_082

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8G7S|1|a|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7S_082 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2635

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8G7S|1|a|G|462
8G7S|1|a|U|463
8G7S|1|a|U|464
8G7S|1|a|A|465
8G7S|1|a|A|466
8G7S|1|a|U|467
8G7S|1|a|A|468
8G7S|1|a|C|469
8G7S|1|a|C|470

Current chains

Chain a

16S Ribosomal RNA

Nearby chains