HL_8G7S_110

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGCAAUGGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7S_110 not in the Motif Atlas

Geometric match to HL_8H1B_001

Geometric discrepancy: 0.2868

The information below is about HL_8H1B_001

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8G7S|1|A|G|2323
8G7S|1|A|U|2324
8G7S|1|A|G|2325
8G7S|1|A|C|2326
8G7S|1|A|A|2327
8G7S|1|A|A|2328
8G7S|1|A|U|2329
8G7S|1|A|G|2330
8G7S|1|A|G|2331
8G7S|1|A|C|2332

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L5

Chain Y

50S ribosomal protein L27

Chain x

Transfer RNA; tRNA