HL_8H6E_002

3D structure

PDB id

8H6E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human exon-defined spliceosome in the late pre-B state.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAUUGCAGUACCUC

Length

15 nucleotides

Bulged bases

8H6E|1|2A|C|164, 8H6E|1|2A|U|167

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8H6E|1|2A|G|158
8H6E|1|2A|U|159
8H6E|1|2A|A|160
8H6E|1|2A|U|161
8H6E|1|2A|U|162
8H6E|1|2A|G|163
8H6E|1|2A|C|164
8H6E|1|2A|A|165
8H6E|1|2A|G|166
8H6E|1|2A|U|167
8H6E|1|2A|A|168
8H6E|1|2A|C|169
8H6E|1|2A|C|170
8H6E|1|2A|U|171
8H6E|1|2A|C|172

Current chains

Chain 2A

U2 snRNA

Nearby chains

Chain 2C

U2 small nuclear ribonucleoprotein B''

Chain 2f

Small nuclear ribonucleoprotein G