HL_8HL4_036

3D structure

PDB id

8HL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.62 Å

Loop

Sequence

UUUAUAA

Length

7 nucleotides

Bulged bases

8HL4|1|A23S|U|146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8HL4_036 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.1501

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8HL4|1|A23S|U|142
8HL4|1|A23S|U|143
8HL4|1|A23S|U|144
8HL4|1|A23S|A|145
8HL4|1|A23S|U|146
8HL4|1|A23S|A|147
8HL4|1|A23S|A|148

Current chains

Chain A23S

23s rRNA (3000-MER)

Nearby chains