HL_8HL4_087

3D structure

PDB id

8HL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.62 Å

Loop

Sequence

GCGAAAAGAUAACAC

Length

15 nucleotides

Bulged bases

8HL4|1|A23S|A|2390, 8HL4|1|A23S|C|2397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL4|1|A23S|G|2385
8HL4|1|A23S|C|2386
8HL4|1|A23S|G|2387
8HL4|1|A23S|A|2388
8HL4|1|A23S|A|2389
8HL4|1|A23S|A|2390
8HL4|1|A23S|A|2391
8HL4|1|A23S|G|2392
8HL4|1|A23S|A|2393
8HL4|1|A23S|U|2394
8HL4|1|A23S|A|2395
8HL4|1|A23S|A|2396
8HL4|1|A23S|C|2397
8HL4|1|A23S|A|2398
8HL4|1|A23S|C|2399

Current chains

Chain A23S

23s rRNA (3000-MER)

Nearby chains

Chain L10E

50S ribosomal protein L10e

Chain L21E

50S ribosomal protein L21e