HL_8HSP_011

3D structure

PDB id

8HSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8HSP|1|A|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8HSP_011 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.0973

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8HSP|1|A|C|419
8HSP|1|A|U|420
8HSP|1|A|U|421
8HSP|1|A|C|422
8HSP|1|A|G|423
8HSP|1|A|G|424

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain D

30S ribosomal protein S4