HL_8HSP_030

3D structure

PDB id

8HSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8HSP|1|A|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8HSP_030 not in the Motif Atlas

Homologous match to HL_4LFB_031

Geometric discrepancy: 0.1642

The information below is about HL_4LFB_031

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8HSP|1|A|C|1449
8HSP|1|A|U|1450
8HSP|1|A|U|1451
8HSP|1|A|C|1452
8HSP|1|A|G|1453
8HSP|1|A|G|1454

Current chains

Chain A

16S rRNA

Nearby chains