HL_8HSP_032
3D structure
- PDB id
- 8HSP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- C(PSU)AGAGGCCCAGG
- Length
- 13 nucleotides
- Bulged bases
- 8HSP|1|V|G|17, 8HSP|1|V|G|18, 8HSP|1|V|C|21
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8HSP|1|V|C|12
8HSP|1|V|PSU|13
8HSP|1|V|A|14
8HSP|1|V|G|15
8HSP|1|V|A|16
8HSP|1|V|G|17
8HSP|1|V|G|18
8HSP|1|V|C|19
8HSP|1|V|C|20
8HSP|1|V|C|21
8HSP|1|V|A|22
8HSP|1|V|G|23
8HSP|1|V|G|24
Current chains
- Chain V
- P-site tRNA_Glu
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- 50S ribosomal protein L5
Coloring options: