HL_8HSP_084
3D structure
- PDB id
- 8HSP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- GUG(6MZ)AGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 8HSP|1|a|A|2031, 8HSP|1|a|G|2032
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8HSP_084 not in the Motif Atlas
- Homologous match to HL_5J7L_183
- Geometric discrepancy: 0.0631
- The information below is about HL_5J7L_183
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61996.2
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
8HSP|1|a|G|2027
8HSP|1|a|U|2028
8HSP|1|a|G|2029
8HSP|1|a|6MZ|2030
8HSP|1|a|A|2031
8HSP|1|a|G|2032
8HSP|1|a|A|2033
8HSP|1|a|U|2034
8HSP|1|a|G|2035
8HSP|1|a|C|2036
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain q
- 50S ribosomal protein L21
- Chain z
- 50S ribosomal protein L32
Coloring options: