HL_8HU1_012

3D structure

PDB id

8HU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8HU1|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8HU1_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2735

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8HU1|1|A|G|462
8HU1|1|A|U|463
8HU1|1|A|U|464
8HU1|1|A|A|465
8HU1|1|A|A|466
8HU1|1|A|U|467
8HU1|1|A|A|468
8HU1|1|A|C|469
8HU1|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains