HL_8I9T_011

3D structure

PDB id

8I9T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAAAA

Length

6 nucleotides

Bulged bases

8I9T|1|C1|A|376, 8I9T|1|C1|A|378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8I9T|1|C1|U|374
8I9T|1|C1|G|375
8I9T|1|C1|A|376
8I9T|1|C1|A|377
8I9T|1|C1|A|378
8I9T|1|C1|A|379

Current chains

Chain C1

RNA (3341-MER)

Nearby chains

Chain Cd

Brix domain-containing protein

Chain Ch

Ribosomal RNA-processing protein 15

Chain LP

60S ribosomal protein l17-like protein