HL_8IE3_017

3D structure

PDB id

8IE3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

C(OMG)UCUUG(1MA)AAC(A2M)CG

Length

14 nucleotides

Bulged bases

8IE3|1|2|C|1325

QA status

Modified nucleotides: OMG, 1MA, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IE3|1|2|C|1315
8IE3|1|2|OMG|1316
8IE3|1|2|U|1317
8IE3|1|2|C|1318
8IE3|1|2|U|1319
8IE3|1|2|U|1320
8IE3|1|2|G|1321
8IE3|1|2|1MA|1322
8IE3|1|2|A|1323
8IE3|1|2|A|1324
8IE3|1|2|C|1325
8IE3|1|2|A2M|1326
8IE3|1|2|C|1327
8IE3|1|2|G|1328

Current chains

Chain 2

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L4

Chain L

60S ribosomal protein L27a

Chain k

60S ribosomal protein L32