HL_8IE3_038

3D structure

PDB id

8IE3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGAUGGCCUCCGUUG

Length

15 nucleotides

Bulged bases

8IE3|1|2|C|2488, 8IE3|1|2|C|2489

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IE3|1|2|C|2482
8IE3|1|2|G|2483
8IE3|1|2|A|2484
8IE3|1|2|U|2485
8IE3|1|2|G|2486
8IE3|1|2|G|2487
8IE3|1|2|C|2488
8IE3|1|2|C|2489
8IE3|1|2|U|2490
8IE3|1|2|C|2491
8IE3|1|2|C|2492
8IE3|1|2|G|2493
8IE3|1|2|U|2494
8IE3|1|2|U|2495
8IE3|1|2|G|2496

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain g

60S ribosomal protein L23a