HL_8IE3_049

3D structure

PDB id

8IE3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGGUCGUCGCGGCCGGCGCCUAGC

Length

24 nucleotides

Bulged bases

8IE3|1|2|C|2905, 8IE3|1|2|U|2908, 8IE3|1|2|C|2909, 8IE3|1|2|G|3590, 8IE3|1|2|A|3596

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IE3|1|2|G|2901
8IE3|1|2|G|2902
8IE3|1|2|G|2903
8IE3|1|2|U|2904
8IE3|1|2|C|2905
8IE3|1|2|G|2906
8IE3|1|2|U|2908
8IE3|1|2|C|2909
8IE3|1|2|G|2910
8IE3|1|2|C|3584
8IE3|1|2|G|3585
8IE3|1|2|G|3586
8IE3|1|2|C|3587
8IE3|1|2|C|3588
8IE3|1|2|G|3589
8IE3|1|2|G|3590
8IE3|1|2|C|3591
8IE3|1|2|G|3592
8IE3|1|2|C|3593
8IE3|1|2|C|3594
8IE3|1|2|U|3595
8IE3|1|2|A|3596
8IE3|1|2|G|3597
8IE3|1|2|C|3598

Current chains

Chain 2

28S rRNA

Nearby chains

Chain a

60S ribosomal protein L19