HL_8IFC_064

3D structure

PDB id

8IFC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-bound E.coli 70S ribosome in the PURE system

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCCAGACAGCGUCGAG

Length

16 nucleotides

Bulged bases

8IFC|1|a|A|1046

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFC|1|a|C|1043
8IFC|1|a|C|1044
8IFC|1|a|C|1045
8IFC|1|a|A|1046
8IFC|1|a|G|1047
8IFC|1|a|A|1048
8IFC|1|a|C|1049
8IFC|1|a|A|1050
8IFC|1|a|G|1051
8IFC|1|a|C|1052
8IFC|1|a|G|1107
8IFC|1|a|U|1108
8IFC|1|a|C|1109
8IFC|1|a|G|1110
8IFC|1|a|A|1111
8IFC|1|a|G|1112

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain g

50S ribosomal protein L6