HL_8IFD_015
3D structure
- PDB id
- 8IFD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dibekacin-added human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GCGGACUGUCCCCAGUGCGC
- Length
- 20 nucleotides
- Bulged bases
- 8IFD|1|1A|G|1178, 8IFD|1|1A|U|1179
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IFD|1|1A|G|1171
8IFD|1|1A|C|1172
8IFD|1|1A|G|1173
8IFD|1|1A|G|1174
8IFD|1|1A|A|1175
8IFD|1|1A|C|1176
8IFD|1|1A|U|1177
8IFD|1|1A|G|1178
8IFD|1|1A|U|1179
8IFD|1|1A|C|1180
8IFD|1|1A|C|1181
8IFD|1|1A|C|1182
8IFD|1|1A|C|1183
8IFD|1|1A|A|1184
8IFD|1|1A|G|1185
8IFD|1|1A|U|1186
8IFD|1|1A|G|1187
8IFD|1|1A|C|1188
8IFD|1|1A|G|1189
8IFD|1|1A|C|1190
Current chains
- Chain 1A
- 28S ribosomal RNA
Nearby chains
- Chain 1B
- 5S ribosomal RNA; 5S rRNA
- Chain 1G
- 60S ribosomal protein L5
- Chain 2D
- 60S ribosomal protein L10-like
Coloring options: