HL_8IFE_094

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

GACUCUUUCGAGGC

Length

14 nucleotides

Bulged bases

8IFE|1|2m|C|539, 8IFE|1|2m|U|542, 8IFE|1|2m|C|543

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|2m|G|535
8IFE|1|2m|A|536
8IFE|1|2m|C|537
8IFE|1|2m|U|538
8IFE|1|2m|C|539
8IFE|1|2m|U|540
8IFE|1|2m|U|541
8IFE|1|2m|U|542
8IFE|1|2m|C|543
8IFE|1|2m|G|544
8IFE|1|2m|A|545
8IFE|1|2m|G|546
8IFE|1|2m|G|547
8IFE|1|2m|C|548

Current chains

Chain 2m

18S ribosomal RNA

Nearby chains

Chain 3Q

40S ribosomal protein S30