HL_8IFE_103

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

UAUUCCCAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|2m|U|1112
8IFE|1|2m|A|1113
8IFE|1|2m|U|1114
8IFE|1|2m|U|1115
8IFE|1|2m|C|1116
8IFE|1|2m|C|1117
8IFE|1|2m|C|1118
8IFE|1|2m|A|1119
8IFE|1|2m|U|1120
8IFE|1|2m|G|1121

Current chains

Chain 2m

18S ribosomal RNA

Nearby chains

Chain 2o

40S ribosomal protein S3a

Chain 3P

40S ribosomal protein S27