HL_8IFE_110

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

CGAGCGGUCG

Length

10 nucleotides

Bulged bases

8IFE|1|2m|C|1423

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|2m|C|1419
8IFE|1|2m|G|1420
8IFE|1|2m|A|1421
8IFE|1|2m|G|1422
8IFE|1|2m|C|1423
8IFE|1|2m|G|1424
8IFE|1|2m|G|1425
8IFE|1|2m|U|1426
8IFE|1|2m|C|1427
8IFE|1|2m|G|1428

Current chains

Chain 2m

18S ribosomal RNA

Nearby chains

Chain 20

40S ribosomal protein S19

Chain 2x

40S ribosomal protein S16