HL_8IFE_119

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

GCCCCCCGUGGC

Length

12 nucleotides

Bulged bases

8IFE|1|2m|C|325, 8IFE|1|2m|C|326

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|2m|G|320
8IFE|1|2m|C|321
8IFE|1|2m|C|322
8IFE|1|2m|C|323
8IFE|1|2m|C|324
8IFE|1|2m|C|325
8IFE|1|2m|C|326
8IFE|1|2m|G|327
8IFE|1|2m|U|328
8IFE|1|2m|G|329
8IFE|1|2m|G|330
8IFE|1|2m|C|331

Current chains

Chain 2m

18S ribosomal RNA

Nearby chains

Chain 2Q

60S ribosomal protein L24

Chain 3H

40S ribosomal protein S6