HL_8INE_084

3D structure

PDB id

8INE (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State G'

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGCGGACUGUCCCCAGUGCGCCC

Length

24 nucleotides

Bulged bases

8INE|1|2|G|1178, 8INE|1|2|U|1179

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8INE|1|2|G|1169
8INE|1|2|G|1170
8INE|1|2|G|1171
8INE|1|2|C|1172
8INE|1|2|G|1173
8INE|1|2|G|1174
8INE|1|2|A|1175
8INE|1|2|C|1176
8INE|1|2|U|1177
8INE|1|2|G|1178
8INE|1|2|U|1179
8INE|1|2|C|1180
8INE|1|2|C|1181
8INE|1|2|C|1182
8INE|1|2|C|1183
8INE|1|2|A|1184
8INE|1|2|G|1185
8INE|1|2|U|1186
8INE|1|2|G|1187
8INE|1|2|C|1188
8INE|1|2|G|1189
8INE|1|2|C|1190
8INE|1|2|C|1191
8INE|1|2|C|1192

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain r

60S ribosomal protein L5