HL_8INF_074
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUAGACGAC
- Length
- 9 nucleotides
- Bulged bases
- 8INF|1|2|U|4976
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8INF_074 not in the Motif Atlas
- Geometric match to HL_5J7L_201
- Geometric discrepancy: 0.0964
- The information below is about HL_5J7L_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.6
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8INF|1|2|G|4975
8INF|1|2|U|4976
8INF|1|2|A|4977
8INF|1|2|G|4978
8INF|1|2|A|4979
8INF|1|2|C|4980
8INF|1|2|G|4981
8INF|1|2|A|4982
8INF|1|2|C|4983
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain Y
- 60S ribosomal protein L17
Coloring options: