HL_8INF_076
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGUCUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8INF_076 not in the Motif Atlas
- Geometric match to HL_5TBW_185
- Geometric discrepancy: 0.3045
- The information below is about HL_5TBW_185
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_83767.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 8
Unit IDs
8INF|1|5|C|36
8INF|1|5|G|37
8INF|1|5|U|38
8INF|1|5|C|39
8INF|1|5|U|40
8INF|1|5|G|41
Current chains
- Chain 5
- 5S rRNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain N
- 60S ribosomal protein L11
- Chain f
- Protein SDA1 homolog
- Chain r
- 60S ribosomal protein L5
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