HL_8INF_077
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGAGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8INF_077 not in the Motif Atlas
- Homologous match to HL_8C3A_074
- Geometric discrepancy: 0.1133
- The information below is about HL_8C3A_074
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 302
Unit IDs
8INF|1|5|G|86
8INF|1|5|G|87
8INF|1|5|A|88
8INF|1|5|G|89
8INF|1|5|A|90
8INF|1|5|C|91
Current chains
- Chain 5
- 5S rRNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain R
- Translation machinery-associated protein 16
- Chain T
- Leydig cell tumor 10 kDa protein homolog
- Chain b
- 60S ribosomal protein L18a
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