HL_8INF_084

3D structure

PDB id

8INF (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State F'

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCGGACUGUCCCCAGUGCGCC

Length

21 nucleotides

Bulged bases

8INF|1|2|G|1178, 8INF|1|2|U|1179

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8INF|1|2|G|1171
8INF|1|2|C|1172
8INF|1|2|G|1173
8INF|1|2|G|1174
8INF|1|2|A|1175
8INF|1|2|C|1176
8INF|1|2|U|1177
8INF|1|2|G|1178
8INF|1|2|U|1179
8INF|1|2|C|1180
8INF|1|2|C|1181
8INF|1|2|C|1182
8INF|1|2|C|1183
8INF|1|2|A|1184
8INF|1|2|G|1185
8INF|1|2|U|1186
8INF|1|2|G|1187
8INF|1|2|C|1188
8INF|1|2|G|1189
8INF|1|2|C|1190
8INF|1|2|C|1191

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain r

60S ribosomal protein L5