HL_8INK_064
3D structure
- PDB id
- 8INK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State D
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCAAGCGUUCAUAGCGACG
- Length
- 19 nucleotides
- Bulged bases
- 8INK|1|2|U|4419, 8INK|1|2|U|4420, 8INK|1|2|U|4423, 8INK|1|2|G|4425
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8INK|1|2|C|4412
8INK|1|2|C|4413
8INK|1|2|A|4414
8INK|1|2|A|4415
8INK|1|2|G|4416
8INK|1|2|C|4417
8INK|1|2|G|4418
8INK|1|2|U|4419
8INK|1|2|U|4420
8INK|1|2|C|4421
8INK|1|2|A|4422
8INK|1|2|U|4423
8INK|1|2|A|4424
8INK|1|2|G|4425
8INK|1|2|C|4426
8INK|1|2|G|4427
8INK|1|2|A|4428
8INK|1|2|C|4429
8INK|1|2|G|4430
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain 4
- GTP-binding protein 4
- Chain J
- Ribosome biogenesis protein NSA2 homolog
- Chain W
- Notchless protein homolog 1
- Chain r
- Coiled-coil domain-containing protein 86
- Chain u
- Guanine nucleotide-binding protein-like 3
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