HL_8IPD_056

3D structure

PDB id

8IPD (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAGCCCCGAGGGGCUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IPD|1|2|G|4097
8IPD|1|2|A|4098
8IPD|1|2|G|4099
8IPD|1|2|C|4100
8IPD|1|2|C|4101
8IPD|1|2|C|4102
8IPD|1|2|C|4103
8IPD|1|2|G|4104
8IPD|1|2|A|4105
8IPD|1|2|G|4106
8IPD|1|2|G|4107
8IPD|1|2|G|4108
8IPD|1|2|G|4109
8IPD|1|2|C|4110
8IPD|1|2|U|4111
8IPD|1|2|C|4112

Current chains

Chain 2

28S rRNA

Nearby chains

Chain G

60S ribosomal protein L7a