HL_8IPY_020
3D structure
- PDB id
- 8IPY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State D'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCGCGCUCGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IPY_020 not in the Motif Atlas
- Geometric match to HL_7KI3_001
- Geometric discrepancy: 0.209
- The information below is about HL_7KI3_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.6
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 21
Unit IDs
8IPY|1|2|G|1404
8IPY|1|2|C|1405
8IPY|1|2|G|1406
8IPY|1|2|C|1407
8IPY|1|2|G|1408
8IPY|1|2|C|1409
8IPY|1|2|U|1410
8IPY|1|2|C|1411
8IPY|1|2|G|1412
8IPY|1|2|C|1413
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L29
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