HL_8IPY_042
3D structure
- PDB id
- 8IPY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State D'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUUCUCUUU
- Length
- 9 nucleotides
- Bulged bases
- 8IPY|1|2|U|2631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IPY_042 not in the Motif Atlas
- Homologous match to HL_8C3A_037
- Geometric discrepancy: 0.1678
- The information below is about HL_8C3A_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8IPY|1|2|G|2624
8IPY|1|2|U|2625
8IPY|1|2|U|2626
8IPY|1|2|C|2627
8IPY|1|2|U|2628
8IPY|1|2|C|2629
8IPY|1|2|U|2630
8IPY|1|2|U|2631
8IPY|1|2|U|2632
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 4
- GTP-binding protein 4
- Chain 7
- Probable ribosome biogenesis protein RLP24
- Chain a
- 60S ribosomal protein L19
- Chain d
- 60S ribosomal protein L22
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