HL_8IPY_059

3D structure

PDB id

8IPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State D'

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGUCGCAG

Length

8 nucleotides

Bulged bases

8IPY|1|2|C|4211, 8IPY|1|2|G|4222

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IPY|1|2|U|4208
8IPY|1|2|G|4209
8IPY|1|2|U|4210
8IPY|1|2|C|4211
8IPY|1|2|G|4222
8IPY|1|2|C|4223
8IPY|1|2|A|4224
8IPY|1|2|G|4225

Current chains

Chain 2

28S rRNA

Nearby chains

Chain J

Ribosome biogenesis protein NSA2 homolog

Chain N

Protein SDA1 homolog

Chain w

G Protein Nucleolar 2