HL_8IR1_056

3D structure

PDB id

8IR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUCAAACGGUAACGC

Length

15 nucleotides

Bulged bases

8IR1|1|2|A|4213, 8IR1|1|2|A|4214, 8IR1|1|2|C|4221

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR1|1|2|G|4209
8IR1|1|2|U|4210
8IR1|1|2|C|4211
8IR1|1|2|A|4212
8IR1|1|2|A|4213
8IR1|1|2|A|4214
8IR1|1|2|C|4215
8IR1|1|2|G|4216
8IR1|1|2|G|4217
8IR1|1|2|U|4218
8IR1|1|2|A|4219
8IR1|1|2|A|4220
8IR1|1|2|C|4221
8IR1|1|2|G|4222
8IR1|1|2|C|4223

Current chains

Chain 2

28S rRNA

Nearby chains

Chain A

60S ribosomal protein L11

Chain R

Ribosome biogenesis regulatory protein homolog