HL_8IR1_078
3D structure
- PDB id
- 8IR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IR1_078 not in the Motif Atlas
- Homologous match to HL_8C3A_074
- Geometric discrepancy: 0.2
- The information below is about HL_8C3A_074
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 302
Unit IDs
8IR1|1|W|G|86
8IR1|1|W|G|87
8IR1|1|W|A|88
8IR1|1|W|G|89
8IR1|1|W|A|90
8IR1|1|W|C|91
Current chains
- Chain W
- 5S RNA
Nearby chains
No other chains within 10ÅColoring options: