HL_8IR1_083

3D structure

PDB id

8IR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGCGCGCUCGCC

Length

12 nucleotides

Bulged bases

8IR1|1|2|G|1408, 8IR1|1|2|U|1410, 8IR1|1|2|C|1411

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR1|1|2|G|1403
8IR1|1|2|G|1404
8IR1|1|2|C|1405
8IR1|1|2|G|1406
8IR1|1|2|C|1407
8IR1|1|2|G|1408
8IR1|1|2|C|1409
8IR1|1|2|U|1410
8IR1|1|2|C|1411
8IR1|1|2|G|1412
8IR1|1|2|C|1413
8IR1|1|2|C|1414

Current chains

Chain 2

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L27a