HL_8IR1_085

3D structure

PDB id

8IR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAGUAACUAUGACUCUC

Length

18 nucleotides

Bulged bases

8IR1|1|2|A|3760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR1|1|2|G|3754
8IR1|1|2|G|3755
8IR1|1|2|A|3756
8IR1|1|2|G|3757
8IR1|1|2|U|3758
8IR1|1|2|A|3759
8IR1|1|2|A|3760
8IR1|1|2|C|3761
8IR1|1|2|U|3762
8IR1|1|2|A|3763
8IR1|1|2|U|3764
8IR1|1|2|G|3765
8IR1|1|2|A|3766
8IR1|1|2|C|3767
8IR1|1|2|U|3768
8IR1|1|2|C|3769
8IR1|1|2|U|3770
8IR1|1|2|C|3771

Current chains

Chain 2

28S rRNA

Nearby chains

Chain T

Ribosome production factor 2 homolog

Chain w

G Protein Nucleolar 2