HL_8IR3_062

3D structure

PDB id

8IR3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State B'

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUUUCAGUACGAA

Length

13 nucleotides

Bulged bases

8IR3|1|2|C|4303, 8IR3|1|2|A|4304, 8IR3|1|2|A|4307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR3|1|2|U|4299
8IR3|1|2|U|4300
8IR3|1|2|U|4301
8IR3|1|2|U|4302
8IR3|1|2|C|4303
8IR3|1|2|A|4304
8IR3|1|2|G|4305
8IR3|1|2|U|4306
8IR3|1|2|A|4307
8IR3|1|2|C|4308
8IR3|1|2|G|4309
8IR3|1|2|A|4310
8IR3|1|2|A|4311

Current chains

Chain 2

28S rRNA

Nearby chains

Chain J

Ribosome biogenesis protein NSA2 homolog

Chain R

Ribosome biogenesis regulatory protein homolog

Chain T

Ribosome production factor 2 homolog

Chain w

G Protein Nucleolar 2