HL_8J7R_001

3D structure

PDB id

8J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the J-K-St region of EMCV IRES in complex with eIF4G-HEAT1 and eIF4A (J-K-St/eIF4G focused)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUGUA

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8J7R|1|C|U|710
8J7R|1|C|U|711
8J7R|1|C|G|712
8J7R|1|C|U|713
8J7R|1|C|A|714

Current chains

Chain C

IRES RNA (J-K-St)

Nearby chains

Chain B

Eukaryotic translation initiation factor 4 gamma 1